Gene sequences

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Trait-Related Loci

Nicotiana tabacum

CDS Sequence

CDS ID	lcl\|NW_015854738.1_cds_XP_016512669.1_25290
CDS Infomation	[gene=LOC107829718] [db_xref=GeneID:107829718] [protein=E3 ubiquitin-protein ligase PRT6-like] [partial=3'] [exception=annotated by transcript or proteomic data] [protein_id=XP_016512669.1] [location=join(2732..2794,2890..2968,3454..4675,4826..4966,5657..5900,6010..6717,9981..10181,10319..10980,11348..11399,11484..12087,12230..12438,12532..13067,13150..13254,13335..13401,13509..>13586)] [gbkey=CDS]
Sequence	ATGTCGATGAAGTTGAACCCTAGCTTTGGTCGACGTCGATCGAAGAAGAAAGAAGAAGAA ATGAAGCGATCGCTTCTTCGCTTTCCTCGCTTCGTCGCTTCCTACATTGAAGCGTGCGCT TCCCTCGGTCGAGTCGCCTCAGGTTGCTTGGTTATTCAGGTCATGAAATGGGCAAATTTG TATGAAACTACTCTCCGTGTGGTTGAAGATATCCGATTTGTTATGAGCCATTCTGCTGTA CCCAGATATGTGACTAGTGATCGAAGAGATATATTGAGAACATGGATGAAACTACTGGCT TTTGTGCAAGGAATGAACCCACAAAAAAGAGAAACTGGTGTTCATGTAGAAGAAGAGGAT GAGAATATGCATTTGCCTTTTGTTTTGGGTCATTCTATTGCAAATATTCATTCTCTTTTG GCGGGTGGTGCTTTCTCTATGAGTAGTGCAGAAGATGCTGATGATACTTTCTCCAATACA CACACAGAAGATTTTGAGGACCAAGATAGCCAAAGACATGCAAAAGTGGGAAGGCTATCA CAGGAAAGTTCTGTATGCAGTATGACTGGAAGGAGTCCACTAGAACATGCATCCAGGGCT CTTGAAGTAAAATCTGATAGTTTTCCTGTATCATCATCTGTTTTATGTTTAATATTCGAG TGCATAAAGGCCATTGAAAATTGGCTGGTAGTCGATAACTCTTTGGGGCCTCTCCTTCAG ATATTATGTCCAAAAACAAGTTCTATTCCTGGCAATAATTTCTCTGTGTTTAAAAAGACA CTTTCAAAATTTAGAAGAGGCAGAGAAATCCTTAAGTCACAGAATCCTCCTTCAAATGGC GTTAGACTCTCGACTTCTGCTGAAGGTTCTAATAAAGAATATTCTTATCCTTCCCGGAAT GGTGGCACTACCTTGGATTCTGGCCAAAGTTCCGGCCGAGAAGCAGCTTGCCTTGGTGGT CATGATGCCAGTATGCTGGAAGGAGATCATGCATCTGAATTAGAAGCTCTCCGGTTGCTG AGTTTGTCTGATTGGCCTGATATAGTATATAAAGTTAGTTTGCAGGATATATCTGTTCAC ATTCCATTGCACCGATTACTTTCGATGGTTTTACTGAAGGCACTAGGAAAATGTTATGGG GAGACTGCACAACCAGGTTCTATTTCTGCTAATTTGTCATCTTCTATCCCTTGTGACTTT TTTGGACATATTCTGGGAGGCTACCACCCACATGGGTTTTCTGCCTTCATTATGGAACAC ACTCTTCGGATTAGGGTGTTTTGTGCTCAGGTTCATGCTGGAATGTGGCGTAAGAATGGT GATGCGGCCATATTATCCTGTGAGTGGTATCGCTCTGTTCGCTGGTCTGAGCAGGGTCTG GAACTTGACCTCTTTCTGCTTCAATGCTGTGCTGCACTAGCCCCTGCTGATCTATTTATT AATAGAATCTTAGCACGTTTTGAGCTATCAAATTACCTATCCTTCAATCTTGAACGCCCT AGTGAGTATGAACCGGCTTTAGTTCAAGAGATGCTTACTCTAATTATTCAAATAGTGAAA GAGCGACGGTTTTGTGGGCTAACCTCGAGTGGGTGTTTGCAAAGAGAGTTGGTGTATAGA CTATCAATTGGTGATGCCACTCATAGTCAGTTGGTGAAGTCTCTTCCTCGTGATCTCTCC AAGATTGATAAATTTCAGGAAGTTTTGGACAGAATAGCAATGTATTCAAATCCCTCTGGC ATGAATCAGGGTATGTACAAACTGCGGTTACCCTATTGGAAGGAACTGGATCTGTACCAT CCTCGTTGGAATTCAAGGGACTTGCAAGTAGCCGAAGAAAGATATATGCGTTTCTGTAAT GCATCAGCATTGACCACTCAGCTTCCAGGATGGAGCATGATTTATCAACCTCTTAGTCGA ATAGCTGAAGTAGCTACCTGTAGGACGATCCTCCAAATTATCCGCACAGTTGTATCTTAT GCTGCTTTTTCTGATAAATCAAATGCTTCACGTGCTCCAGATGGTGTTCTGTTAACATCA CTGCATTTGCTATCACTAGCATTGGATATTTGTTATGCACATAGGGAATCTGGTGAACAT TCTTGCTGTGAGGGTGATGTTGTTCCTATTTTAGCACTAGCTTGTGAAAAAATATCAGTG GGTAGATTTGGTGAACAGAGCTTGCTGTCTCTACTCGTTTTCTTAATGAGGAAACATAAG AAAGGAAACGACTTTGTGGAAGCTGGAATGTTTAATCTGTCATCTTTGATTGAAAGTCTC CTGAAGAAATTTGCTGAACTACAACCCGAATGCATGGACAAACTGCAAGACCTTGCTCCG GAAGTGGTCAATCAATTATCTCGATCCTTTCCAAGTGATGATACTAATAGCTTCAGATCA TTTTCAGACAGTGATAAGCGTAAGGCTAAAGCTCGAGAGAGACAAGCTGCTATACTGGAG AAGATGAGGGCCCAGCAATCCAAGTTTTTAGCAAGCATTGATACCACAGCAGATGCTGCT GTAGATGATTCTAAACGTGGTAAAGAGTCATGCAATTCAGATGCTAGACCTAGATCTGAA GAGGCTACTCCTGTGATTTGCTCTCTTTGCCATGACCCAAATTCTAAAAGTCCTGTATCT TACCTAATTCTTCTTCAGAAATCCAGGCTTCTCAGTTTCACCAACAGAGGTCCTCCTTCA TGGGAACAAACTCGCCGCTCTGGGAAAGAGCCCATGTCTTGTGCCAAAAAACTGAAAGAC ATTTTATCTGAAAGGAGCAATCTCTCAAGAAGTTCAGAAATTATTTCATCGTCTTGGTTA ATGCAATTAATCCAAAATGAAGTAAATGAGCTTGCTTTAGAAGGACAACCTAATGAAGTG GAGGCATTTGTGGAATATATCAAGGCAAAATTCCCCCCAATGAAGAACATTCAACCTCCT TGTGTATCAAGCATTGTAAAGAAAAAGACAGTCTCTTCCTTCGAGATGCTAGAAGAACAC ATGTACTCGTTGATTCGGGAAGAAATGGATGTTAACTCACGGAGCTGGGATCCTTTGAAA AATGATAAGAAGCTCTCAGCATTGGGTGGTAGTGGGCGTGCTGCGTCACTTTTGCTTGGA AGATACATTTCTGCTCTTTCAAGAGAACATAGTCCTTCTGCGTCGGTGAATAGCCACAAA GCACAACTGGAGTCAAGTATGGTGCGTCCAGCATACGATGGATTTGGTCCATCAGATTGT GACGGGGTATATCTTTCATCCTGTGGTCATGCGGTGCATCAGGGATGCCTTGACCGCTAT TTATCTTCGCTAAAGGAAAGGTACACCAGAAGACTTGTTATTGAAGGAGGTCATATTGTA GACCCGGATCAGGGGGAGTTCCTCTGTCCTGTATGCCGTGGACTTGCCAACTCAGTGCTG CCAGCATTACCTGGAGACACTAAAAGGTTGACACAGTCTGTTTCAACTGGTCCATCAGAT GCTGTAGGCCCTTCAGCACTTCGTTTTCAAGAAGCTTTATTTCTCCTGCAAAGCGCAGCT GATGTTGCTGGAAGTAAAGAGATTCTACACAGTTTTCCACTTCAGCAATTTGGGCAGATG AGAATAAATCTTGAATCTGTGGTTGGGGTATTATGTGAAATGTATTTCCCAGACAAGGAT AAGATTTCAGAATCTGGTAGGCTTAGTCATTCTCTGATCTTGTTTGACACACTCAAGAAC TCACTTGTATCAACAGAAATTGCTGCTCGATCTGTGAAGACTTCTTTAGCTCCAAACTAC AGCCTTGATGCCCTGTATAAAGAACTCAAAGCTTCAAACTGTTTTATATTAGCCTTGTTA CTAGGTATTATACAAAGCACACGGACAAAGAATTCACTTACTGTCCTGTTGAGGTTAAGA GGTATTCAGTTGTTTGCAGAGTCTATATGCTCAGGCACTTCTGCAGATGAGCCTCCAGAC AGTCCATCTGTTGGAGGTAATATGCAAGTTATTTTGGAATGTTCTGAAACAGAATTACAG TACCCCGATATTCGGTTCTGGAAACGAGCTTCTGATCCAGTTCTTGCACATGATGCTTTT TCATCATTAATGTGGGTGTTATATTGCCTTCCGAGCCCATTTCTATCGTGCGAGGAATCA TTCTTGTCTCTTGTTCATCTTTTCTATGTTGTCACTATCACTCAGATTGTAATTACCTAT TGCAGAAAGCGGCAAACTAGTTTGACTGAGTCAGGAGGCAGTGATTCTCTGGTTACTGAC GTCTACAGAATAATGGAGGAATATGGAGTTGCTTATAAATATTTTGATTCTAATCATATT GAAACTTGTGACATCAAAGATGCAATTCGTAGCCAGAGTTTTCCTTATTTAAGAAGATGT GCATTATTGTGGAAATTGATTCGTTCTTCTATATCAGAACCATTTAGTGACGGGAATAAC GTATTAGATGGATTACCATATTCCATGGCTGAAACAATGGAATGTGGCGAAAAATTTGCA GATGAGTTCACTGAGATTGAAAAATTGGAAAAGTTATTTAAGATTCCCCAACTTGATGAT GTTATTAATGATAACATAATACGTTTTGTGGTTCCAAGATGGTTGCATCGTTTCTCCAAG CAGTTTGAAGCTCACAGTCTAAAGAGTGTTTTGTATTCTACCCCTGCTGTCCCATTTAAA CTGATGCTTTTGCCTCATCTTTACCAGGACCTCTTACAGAGGTATATTAAACAGCACTGT CCGGACTGTGGAGTTGTACAGGAGGAGCCTGCATTGTGCCTGCTGTGTGGTAAACTGTGC TCTCCGAATTGGAAGTCATGTTGCGGGGAAAGTGGGTGCCAAACACATGCAATGGTTTGT GGGGCGGGTACTGCGGTGTTCTTATTAGTCAGAAAAACCACAATATTACTTCAAAAATCC GCTCGTCAGGCATCGTGGCCTTCCCCATACTTGGACGCATTTGGTGAAGAG

Peptide Sequence

PEP ID	XP_016512669.1
PEP Infomation	PREDICTED: E3 ubiquitin-protein ligase PRT6-like [Nicotiana tabacum]
Sequence	MSMKLNPSFGRRRSKKKEEEMKRSLLRFPRFVASYIEACASLGRVASGCLVIQVMKWANL YETTLRVVEDIRFVMSHSAVPRYVTSDRRDILRTWMKLLAFVQGMNPQKRETGVHVEEED ENMHLPFVLGHSIANIHSLLAGGAFSMSSAEDADDTFSNTHTEDFEDQDSQRHAKVGRLS QESSVCSMTGRSPLEHASRALEVKSDSFPVSSSVLCLIFECIKAIENWLVVDNSLGPLLQ ILCPKTSSIPGNNFSVFKKTLSKFRRGREILKSQNPPSNGVRLSTSAEGSNKEYSYPSRN GGTTLDSGQSSGREAACLGGHDASMLEGDHASELEALRLLSLSDWPDIVYKVSLQDISVH IPLHRLLSMVLLKALGKCYGETAQPGSISANLSSSIPCDFFGHILGGYHPHGFSAFIMEH TLRIRVFCAQVHAGMWRKNGDAAILSCEWYRSVRWSEQGLELDLFLLQCCAALAPADLFI NRILARFELSNYLSFNLERPSEYEPALVQEMLTLIIQIVKERRFCGLTSSGCLQRELVYR LSIGDATHSQLVKSLPRDLSKIDKFQEVLDRIAMYSNPSGMNQGMYKLRLPYWKELDLYH PRWNSRDLQVAEERYMRFCNASALTTQLPGWSMIYQPLSRIAEVATCRTILQIIRTVVSY AAFSDKSNASRAPDGVLLTSLHLLSLALDICYAHRESGEHSCCEGDVVPILALACEKISV GRFGEQSLLSLLVFLMRKHKKGNDFVEAGMFNLSSLIESLLKKFAELQPECMDKLQDLAP EVVNQLSRSFPSDDTNSFRSFSDSDKRKAKARERQAAILEKMRAQQSKFLASIDTTADAA VDDSKRGKESCNSDARPRSEEATPVICSLCHDPNSKSPVSYLILLQKSRLLSFTNRGPPS WEQTRRSGKEPMSCAKKLKDILSERSNLSRSSEIISSSWLMQLIQNEVNELALEGQPNEV EAFVEYIKAKFPPMKNIQPPCVSSIVKKKTVSSFEMLEEHMYSLIREEMDVNSRSWDPLK NDKKLSALGGSGRAASLLLGRYISALSREHSPSASVNSHKAQLESSMVRPAYDGFGPSDC DGVYLSSCGHAVHQGCLDRYLSSLKERYTRRLVIEGGHIVDPDQGEFLCPVCRGLANSVL PALPGDTKRLTQSVSTGPSDAVGPSALRFQEALFLLQSAADVAGSKEILHSFPLQQFGQM RINLESVVGVLCEMYFPDKDKISESGRLSHSLILFDTLKNSLVSTEIAARSVKTSLAPNY SLDALYKELKASNCFILALLLGIIQSTRTKNSLTVLLRLRGIQLFAESICSGTSADEPPD SPSVGGNMQVILECSETELQYPDIRFWKRASDPVLAHDAFSSLMWVLYCLPSPFLSCEES FLSLVHLFYVVTITQIVITYCRKRQTSLTESGGSDSLVTDVYRIMEEYGVAYKYFDSNHI ETCDIKDAIRSQSFPYLRRCALLWKLIRSSISEPFSDGNNVLDGLPYSMAETMECGEKFA DEFTEIEKLEKLFKIPQLDDVINDNIIRFVVPRWLHRFSKQFEAHSLKSVLYSTPAVPFK LMLLPHLYQDLLQRYIKQHCPDCGVVQEEPALCLLCGKLCSPNWKSCCGESGCQTHAMVC GAGTAVFLLVRKTTILLQKSARQASWPSPYLDAFGEEDSEMHRGKPLYLNEERYAALTHM VASHGLDRSSKVLRPTNIGTFFML

Transcript Sequence

Gene sequence data has not been registered.